rs30613746 SNP Detail

Summary

• ID
  rs30613746
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:97267562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAAAAGC AGGAACTTAC
  AAAACACACT TTTAGCTAGG CGGTGGGCTT GCTTTTAATC CCAGCACTCA GGAGACAGAG
  ACAGGTGGAT CTCTGAATTC AAGACCAGCC TGGTCTACAA ATTAAGTTTC AGGGCAGCCA
  GGGCTACACA GAGAAACCAC GTCTTGAAAA AAAAATCCAA ACCACCCAAA AAAGTTTAAC
  Y
  ACATAGGAAT GTATTTATAT GATATCAAAA TTTTGAGAAT GAGATGTATA ATTTTATACA
  TAATATAAGA TGCAAAACTG TATTTACTAT ATCATTATGA TCATGTTAGA ATGGACAGAG
  AGAAATGGAG AAATGTGTCA AATGTTAGTA TTCCTGTCTC TGGTTGGTGA GATTACAGCT
  CCATTGTTAT CTTTCTAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45948398	mCV22632961	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss133417079	ENSMUSSNP6196397	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30613746					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:97267562 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D6Mit326	DNA Segment, Chr 6, Massachusetts Institute of Technology 326			1247 bp proximal
Frmd4b	FERM domain containing 4B			Intron
				Noncoding-Transcript-Variant
Rr635133	regulatory region 635133			546 bp proximal