rs30612295 SNP Detail

Summary

• ID
  rs30612295
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52739836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGTGGAGGGC CAAAGGGCAG GTGCTATGAA GCAACATCCT GAGCTACTTT AAGCTCCAGA
  GCAGCATTGA AAACAGGTGA ATCCCCAACC CTTCACCCTG CTTCCTTATT CTGTGAACTG
  AGACATTCAG ATCAGAGCAA GAGCAAAGAA AGATCTGACT TCTTATAAAC CGTCTCAGTT
  TCCATGTTTT CTTCCAGGCA CAGTTGTGCT GGTTCATCTT TTTCTACACC CTCCATCCTT
  CCAAGATGCC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  W
  CTCTCACACA CACACACACA CACACACACA CACACACTTC ACTTACTTGC AACCATCTTT
  AACAATGCAA ACAGGAGGAA CAAGGTAAGA TGGAGTGTTT GGGGTAGAGG TGTGCAGCAG
  CCAAGTGCTG TCACAATCAG CACACCCAAG CACCGTTTGT AATAGATTGT TCCTGTAAAT
  TAGCGGCTCT AGCTGACAGA GCTATGAGTG CTTTTGGAAA GCTTCTCTAT CAGTGTCAAA
  ATCAAAGGCA GAGGGCGCGG AGAAGGCTGG GTTTAGCAGG GTGGCATTTT AGATGTGGAT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45448042	mCV24464736	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30612295					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52739836 () rs orientation: forward

Symbol	Name	Function Class
Rr576587	regulatory region 576587	88 bp distal