rs30611047 SNP Detail

Summary

• ID
  rs30611047
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121079256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGTTCCA AGTACCTGAC
  CTACTTACCT ATGATCGACG TGTACAGGGC TGACTGCGGT CAGTCTGACA TCCACAGGAA
  TAGGGCTGAT TGCAGTCTAA CATCCACAGG GATAGGGCTG ACTGCAGTCT GACCCTTATT
  TTCTTCTCCT GGTTTCCGTG GAAAGGCTGC ATCTGTTACT TTTCTGTTGC TGTTATAAAA
  Y
  ACCATGACCA GGTCAACTTA CAGAAAGAAG TGTTTATTTG GGCTTACAGT CCAGAGGGAT
  AAGTTTCCTG GTGGTGAATG GGCACACCAG CGTTCAGCAG GTGTAGCTAC CTAGCGGCAG
  GAACAGCAAT CTAGTTGTTC ACATCTAGAA CAGCAAGTGC AAAGCAGACA ATGACTGTAA
  ATACGAGAGG CTCTTTACTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45447575	mCV23993561	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss135717543	ENSMUSSNP2493466	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30611047					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121079256 () rs orientation: forward

Symbol	Name	Function Class
Rr584034	regulatory region 584034	within coordinates
Rr584035	regulatory region 584035	871 bp proximal
Rr584036	regulatory region 584036	1424 bp proximal
Rr584037	regulatory region 584037	1757 bp proximal