rs30607865 SNP Detail

Summary

• ID
  rs30607865
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138351699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGT ATACAGGTCA CAGGATAAGG
  W
  ATATGGGTCA AGGGTACAGC TGCTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45447741	mCV22920460	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30607865					SNP	T	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138351699 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13877	CpG island 13877	1658 bp distal
Gm43723	predicted gene 43723	1994 bp upstream
Rr586173	regulatory region 586173	214 bp distal
Rr586174	regulatory region 586174	360 bp distal
Rr586175	regulatory region 586175	945 bp proximal