rs30606340 SNP Detail

Summary

• ID
  rs30606340
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19401340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTGTTGAA ATTTTTATCT
  CTCCTTAAAA GTGATATCTT TCATATGGAC TAAAAGGTCT TCTCTGTGTT TGACCTCATA
  TATGGGCTGA TGTAGGAGTT CTGTACAACC AGCCTGGCAT GAGAGATCTA GTCTCTGCCA
  GAGTCAATGC TGGGCAAAGT CTTACTGCAG ATGTCTTATC GTCAATGGTG GTGTCTCCCT
  R
  TCATCACCAT GACATTGACG TATCCATAGC AATGACCTAG CTTTCTGATC CCCTGGTAAA
  GAGATAACTT GGAAAATGAT CAGCGATAGG TAGAAATCTG ATGAATTATA AGAAAAGGAA
  GAAAAAGAAG GAGGGGAGAT GGGGAGAAAT GGAGAAAGGA AGTCACGCAG GCAGAGGATA
  GAAAAGAAAG TAATAGTAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45447236	mCV25299504	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss134667119	ENSMUSSNP6879071	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30606340					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19401340 () rs orientation: forward

Symbol	Name	Function Class
Gm52602	predicted gene, 52602	1764 bp downstream
Rr573976	regulatory region 573976	1069 bp proximal