rs30605100 SNP Detail

Summary

• ID
  rs30605100
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131670006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGGGTATGTC TGTGGGCATT TCATTTTCTT GATTAATGAT TGCCAGGAGA GGACCCAGCC
  CACTGTGGGT CCTGTCATAC CTGAACATGT AGTCCTAGAC TATATAAGAA AACAACCAGT
  TAAGCAGAGT GCTTCCATGG TTCCTGTCCT TACTCCTGCT TGAGTTCCTG CCCTGACTTC
  CCTCAGTGGT GTACTGTATC TGGCTGTATG TGTTCAGTAA AAAAAAAATT TCTCCAGCAA
  GTTAGTTTTG GTCAGTGTTT TATAACAGCA GCAGAAGCAG CAGCAGCAGC AGCAGCAACA
  R
  CAACAACAAC AACAACAAAC AACAAAACAA CCTAGGGCAT TTATCTTTGT GTCTCACGAA
  ATATATCAAC TTACCTCCAC TATTAATGAT AAAGTCAGAC AAAACCATGC CTTCTTGCGA
  CCTGTGCTTT TAGGTGTGGA CAGCAGGTGA AAGAAAACAT TATCTGCTTC ATCCGAAGGC
  TGTCTCTGGC ATTTCTCAGT GTGTATTAAT TAAGCCACTC AGCACCCAAA GGAGGCGTGG
  CTTGTTTACC CAACATCTCA GAGGTCCTAG CTTGCTCCTC CCACCCATCT GCCAACCCAT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45447714	mCV22370454	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30605100					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131670006 () rs orientation: forward

Symbol	Name	Function Class
Gm29865	predicted gene, 29865	within coordinates
Rr585395	regulatory region 585395	442 bp proximal
Rr585396	regulatory region 585396	1615 bp proximal