rs30604968 SNP Detail

Summary

• ID
  rs30604968
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:90568470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATATTGTT GGGGAGATTG
  ATGGAGGGCA GGATGGAGAA TGTAGATACG ACCTTAGCTG GGTAGTTAAA ATAAGAAAGT
  TGTCAGGACA GAGGCATTCC AAGCTGTGGA GGAAATAGAC GTTGTCACAT CCCATCTTAA
  GGCACCTCTA TTCCAGTGTC TCATGGAGGG CCTCTGTACA ATGGGGTCTG TAATGCATGT
  R
  CCTCATAGGA TTGAGAGTTA AGAGGGTTTA TGTAAGTAAA GCATTGGGGA AGTCCTCACA
  ATGGTACACA CAACACACAC CCAGTAATTG TCAGTTATTA GCCTCTATTA TTCACTGCTA
  TTACAGTCGT GGCTGCTGCC TTTGTGCATG TCAGACACTG TGCTGGCTTG TGGTCAGCTA
  ACAATGTCTT GATGGGACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45446825	mCV24984115	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss135478368	ENSMUSSNP2946841	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30604968					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:90568470 () rs orientation: forward

Symbol	Name	Function Class
Tssr946	transcription start site region 946	1173 bp downstream
Tssr30264	transcription start site region 30264	1503 bp downstream
Tssr34247	transcription start site region 34247	1727 bp upstream
Tssr34248	transcription start site region 34248	1715 bp upstream