rs30603709 SNP Detail

Summary

• ID
  rs30603709
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49861582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAGTCAGTG AGCCTCGTCT TACTGCAACC TGATATGCCA
  AGTCTGGTTG CTATCCATAG GAGGCCTTTT CTTCTCTGAA AATAAATAGA TGTTGGGGGC
  M
  TGGGGCGGGG GCGGGGGGGA GATAGGGAGT ACTAGAAGAG AGAAGTGAGG GAAAACTGTG
  GTCAGGACGC AAAATTAGTT AATTTAAAAC ATATTGGGC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45446071	mCV24919827	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	C
ss135146488	ENSMUSSNP2800489	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss320753400	CHEV_3_49711055	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30603709					SNP	A	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49861582 () rs orientation: forward

Symbol	Name	Function Class
Rr576122	regulatory region 576122	1260 bp proximal