rs30603371 SNP Detail

Summary

• ID
  rs30603371
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49821621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCATACATT TGTTATTAGT GAAGTTAAGA CCACGCTGGA
  AGAATCGTAA ATCCAAGCTG TAAATTCACT GATTTTTTTT AGAAGATTCA TTTATTTTCT
  W
  CCATAGGAAA TAAAATTCTA CTGCAGGGGA AGATCCCAAT ATGACTGCAT ACATTTATGA
  GGATCATTTT ATGCTCTGTT GCTGTGGGCT ACTGCTGGT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45446142	mCV24852417	ABI	CRAMUS_MOUSE	f	SNP	T		A
ss135145467	ENSMUSSNP4610596	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30603371					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49821621 () rs orientation: forward

Symbol	Name	Function Class
Rr576117	regulatory region 576117	107 bp distal
Rr576118	regulatory region 576118	85 bp proximal