rs30597050 SNP Detail

Summary

• ID
  rs30597050
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:53485204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTT CTCAAGAAGC ATTATGTGAC
  R
  GAACCCGAGG AACACAGGAC AAACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45445501	mCV24468147	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss135182351	ENSMUSSNP5437685	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320768859	CHEV_3_53381705	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30597050					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:53485204 () rs orientation: forward

Symbol	Name	Function Class
Frem2	Fras1 related extracellular matrix protein 2	Intron
Rr576720	regulatory region 576720	734 bp distal
Rr576721	regulatory region 576721	1444 bp proximal