rs30596638 SNP Detail

Summary

• ID
  rs30596638
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70005282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGCAGGGTT TCGGATGAGC
  TGACACCATG GAGCCTCCAG GACCCAGCAC GCCCACAGCC TCTGCCGCTG CCCGGGCAGA
  TCACTACACC CCAGGCCTCC GGCCACTCCC GAAGCGCAGA CTTCTATATA GCTTTGCGTT
  GCTGCTTGCT GTGCTACAGG TGAGTGTGGC GCGACTGCGG TGCCCGAAGT GGGAAGCCGG
  Y
  CAGGAAAGGA AATGGCAAGG AAATGTCCTG AGAGCCGGGC GCGCACGTGC GTGTGGTGGG
  AGAGGTCTGA CACTGCGGGG GGTGGGGGGG ACACGACTCC GCGGGGGTCC AGGTAGGCCT
  CAACAGGGAA GCCTAGAAGG TTCGATGGTG GGGTGAGAGG GTTGGGGGGG TGGAGTGAGA
  GGGGGGGTGG AGTGAGGGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39201774	mCV22654181	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30596638					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70005282 () rs orientation: forward

Symbol	Name	Function Class
4930480K23Rik	RIKEN cDNA 4930480K23 gene	720 bp downstream
Rr494753	regulatory region 494753	351 bp distal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	Intron
Tssr126375	transcription start site region 126375	307 bp downstream
Tssr126376	transcription start site region 126376	280 bp downstream