rs30596271 SNP Detail

Summary

• ID
  rs30596271
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37780903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGA ACATGGCTAG AGATTGACAG
  R
  TAGTGAGGGT CTCTGTGTTA GGCAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45444521	mCV24774597	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss134812086	ENSMUSSNP4112698	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss320712088	CHEV_3_37625676	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30596271					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37780903 () rs orientation: forward

Symbol	Name	Function Class
Gm36620	predicted gene, 36620	within coordinates
Rr575550	regulatory region 575550	1774 bp distal
Rr575551	regulatory region 575551	within coordinates
Rr575552	regulatory region 575552	1376 bp proximal