rs30595731 SNP Detail

Summary

• ID
  rs30595731
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153666926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATTGGCAG GTTGCCATAG
  TCCTACACTG CAGGAGAGCA TCCCTGGGTG AGTGTAAGCA AGGCAGCACC ACTCACCAGC
  AGCAGTTATT TATTTATTTA TTTATTTATT TATTTATTTA TTTATTTATT TATTTATATC
  ACAATCAGCT TATTTACCTC ATGAGAGCCA ATCTTGAACA GAGAGCAAGT TATTTCACCC
  R
  TCTTCCAGTT TGGACCTAAC AGCCCAGAGA CAGGAATTTT AGAGGACAGA ATGGGACAGG
  CACATAACCC ACCTCCACAA TGGAAGGAGG ACGAGTTTCT ATGCAGCCAC TTGGGGAGCT
  TAGTGTGGCC TCTTCAGTGA ATGCTGTCCT CTGTGGCTGC AGCCTTGGAG ACTAGAAAAG
  ATTGTGGAAG TGACCCTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47464951	NES10334451	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30595731					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47464951	NES10334451	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153666926 () rs orientation: forward

Symbol	Name	Function Class
Gm64825	predicted gene, 64825	within coordinates
Rr587804	regulatory region 587804	1381 bp distal
Rr587805	regulatory region 587805	1683 bp distal
Rr587806	regulatory region 587806	1130 bp distal
Rr587807	regulatory region 587807	813 bp proximal
Rr587808	regulatory region 587808	898 bp proximal