rs30570967 SNP Detail

Summary

• ID
  rs30570967
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:55128931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAAATGAT CACACAAAAG
  GCCAACATAA CCAGTCCCAT CACCATGCCA CTTACCAAGC ACTGCCCTCT CCACATTGTG
  GCTCTGTGAC TCAGTTGTCC CCCTCTGCAC TTTGCTTGAG GACCTTCTAA CCACCTCTGT
  CTCACACTCT CCCAGGTACA AGGGACCCCC CCCTGCCCCC AGCAGCTGTG CTATCCTGCT
  Y
  CGGGATACCA TAGGCTTGCT TTATGTAGGA TAAGTCTTGT AGCCCAGCGG GTGTCACTTA
  CATAGTAGTT TGAATCTTTC GTTAAAAGCA AAATAAACAC CCTTAAAGTC CCCCACTTAG
  TAAATAAAAC ACAGCCCACT TGTAACACCA GCCTTTCTTT CCCTGAGATC AGCCCCTGGG
  AAGGGTTGGT TAACACTTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46961215	NES10811614	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30570967					SNP	T	T	C	T	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46961215	NES10811614	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:55128931 () rs orientation: forward

Symbol	Name	Function Class
Rr576916	regulatory region 576916	1185 bp proximal