rs30564955 SNP Detail

Summary

• ID
  rs30564955
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:55131045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAGCTGAT CCCCGTGGGA
  GTACTTCTCC TGGGTGACGG GATATAGAAA GTGTCCAGTT GCCTGAGATG GGACATCCAA
  CAGGCCACAA AACCCAATGC TACTCAAGTC AAGCTGGGTG AACTAATGAA TTTCATCAGC
  TCACTTAGAG GATTTTGGAT GCCTCTGACA GAAAAGCCCT ACCCCAGAAT GGTAGATGAC
  K
  CAGGAAAGCC AAATCGCTGG GGCCTCAAAC CATAACCAAC TTTGTACCTC CCCACAAAAG
  CACATTAGGC TGGGGGTTGA GAAGGAGTGG TGGCTGGAAC CTCGGATGGG AGTCTGATGA
  CTCCCCGAGT CCAGGGCAAG GCAATAGCCA TGATCTCATG AATGTCTCCT TCATGTTGCT
  CTGACTGAAG TCATGTCATG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46961239	NES10811464	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	G	G	G	G	G	G	T	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30564955					SNP	G	G	T	G	G	G	G	G	G	T	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46961239	NES10811464	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:55131045 () rs orientation: forward

Symbol	Name	Function Class
Rr576916	regulatory region 576916	908 bp distal