rs30563426 SNP Detail

Summary

• ID
  rs30563426
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7732663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGTTACA GGTCCAACGG
  CTACTTAGTT TATCTTAGGC TTGCTTTAGT CACAACTCCT AACAGCCATT CCTTGCTCAC
  CTGTGTCAGA ACTAACATCC TGTGACTAAC GGATGAAAAC CTTGGGAATC TATTAACTGA
  GTAGGCCCCT AGCTTGCACC AACTCCAAGG CTAAGAATGT CATCCGACAG CGTCTGAAGA
  Y
  GTACAGAAAG GACGACCTCC AAGCTTGCTG TAACCGCCTC TCTAAAGTAC CCCTCCATGT
  GTTTCCAACT CGCCTTGATT TATGACTTTG TTCTGTAAAT CTATAAATGT TCATGAATCT
  GCTTCCACTT TGAAGCAAGT AGTTTGGGGT GGCTTAAATC TGAATTCCTA GCCTTGGTCA
  CTCAAAATGG CCCCAGAGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45940759	mCV24779791	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss132954105	ENSMUSSNP466565	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs30563426					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7732663 () rs orientation: forward

Symbol	Name	Function Class
Rr626314	regulatory region 626314	207 bp distal
Rr626315	regulatory region 626315	314 bp proximal
Rr626316	regulatory region 626316	574 bp proximal