rs30559280 SNP Detail

Summary

• ID
  rs30559280
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83356348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGACGTTT TTGAAAGCCA
  ACTATCTATG TAAAGTAATC TTGATTGTTG TCTGTTAACT ACCCTCAGCT ACTTGTAATT
  AAAATAGCTG AAAACACCCT AACAATAAAC TCAGAACCAT GAATTTGCTA TCTGGCCTTT
  AACTCACAGG CTTAAACATC TCAGAGAAGT TTATAATAAC AGTTATAGAA GGACTGGGTC
  S
  AACCCTTCTA CTTTTAAAAT TTTTGTACCA ATAGAAGAAA TTTATACCAA TGAAAGCCTT
  GATTCTGCAT CAAAATAAAT TCTGTAGCAA AATAAGAAAT TATGACTTCA ACTTAGTAAC
  TATTATAAGG ATTCCTACCA AATGAGATTA TGGCTACACA ATCAATTCTA GCTATTTCCT
  CCCTATTCCA GTTATGACCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45442914	mCV23503640	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30559280					SNP	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83356348 () rs orientation: forward

Symbol	Name	Function Class
Rr578862	regulatory region 578862	1689 bp proximal