rs30558393 SNP Detail

Summary

• ID
  rs30558393
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:79382119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTCAAACA TGTATTTTAA
  GAGTTGGAGG TAATAGGTCA GTGAGCACAT GTCTAGTACG TGGGAAGGAG GGAAAGAGGG
  GGACAGACAA GTGAGATGGG CATGGTGACA CATGCCTATA ACCCCAGAAC TCGAGAAGAT
  CATAAGAGGA TTGCAAGCTC GAGGCCCACC TGGGCTACAT GGTAAGATGA TGTCTGAAAA
  R
  ACAAGCAACA ACATAACTGA GTTCATTTAA AAGCCCTCTG AACACATCTC CCAGTCCCAG
  TGGGGCTGCT TCAGGGCGCC AGCTGCAGAA GGCAGAGCTG CAGGCCCAAG TTACTAATGT
  ATCCTAGAGA AATGAAAACA GCCAGGGTGT CGTAAACAAG ACTCATCCAA AACGGTTTCC
  TCTCTAACCT GTTGATTTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45442906	mCV24555320	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss135372194	ENSMUSSNP3425621	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30558393					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79382119 () rs orientation: forward

Symbol	Name	Function Class
Fnip2	folliculin interacting protein 2	Intron
Rr578524	regulatory region 578524	within coordinates
Rr578525	regulatory region 578525	1220 bp proximal