rs30557510 SNP Detail

Summary

• ID
  rs30557510
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87665049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCAC ACGTGCACAC ACACATGCGC
  R
  TGCACACATG TGCTTACTTT CTAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45442835	mCV25326039	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss135468152	ENSMUSSNP5006471	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320835383	CHEV_3_87561664	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30557510					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87665049 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13335	CpG island 13335	890 bp distal
Pear1	platelet endothelial aggregation receptor 1	Intron
Rr579538	regulatory region 579538	1601 bp distal