rs30554548 SNP Detail

Summary

• ID
  rs30554548
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107112810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTG GGGGCAGGCT TTGAGGTCTT
  Y
  GGTGATCAAT CTCTGACCAG TGTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45442100	mCV24919069	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss135583306	ENSMUSSNP372501	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss320864597	CHEV_3_107008412	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30554548					SNP	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107112810 () rs orientation: forward

Symbol	Name	Function Class
Rr582930	regulatory region 582930	461 bp proximal
Rr582931	regulatory region 582931	685 bp proximal
Rr582932	regulatory region 582932	998 bp proximal