rs30551132 SNP Detail

Summary

• ID
  rs30551132
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95423822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGTCTCAA CCACTGAGCT
  GTCTCTCTAG GCCCTCCAAC TGCTTGTTGG TCTCGTTTAT TACATAGTCC CTTTCTGAAT
  TTTTCTCCAG TTGCTTAAAG CACCTTTTCA CTGTTGGTTA CTTCAAGTCA GTATCCAAGC
  TGCAGTTCAA CTTTAAATAT TAAGTTGATT GTAGGGTTGG CAAGATGGCT CAGCAATGAA
  Y
  GCACTTGCTG TCAAGCCGTC CCAGGACCTA CACGGGAGAA GTAATGCAGC CATCCCTCCA
  AGTTGCCCTC TGACCTCCAC ACACACACAG TGGTATGTGC ACACTTTACA CATACACTCA
  ATGAACAAAT GTAATTTCTG AAGAGTCTGC TCTGTTCTTT AACAGTCACC TACTCCCACC
  CTCCCTATAC ACACACTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45440938	mCV24564348	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss135511924	ENSMUSSNP1694700	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30551132					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95423822 () rs orientation: forward

Symbol	Name	Function Class
Rr580957	regulatory region 580957	621 bp distal
Rr580958	regulatory region 580958	within coordinates
Rr580959	regulatory region 580959	1124 bp proximal