rs30547371 SNP Detail

Summary

• ID
  rs30547371
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58601926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTT TTTCAAGACA GGGTTTCTCT
  R
  TGTAGCCCTG GCTGTCCAAG AACTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45440005	mCV23124008	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135208188	ENSMUSSNP2392208	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss320783427	CHEV_3_58498427	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30547371					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58601926 () rs orientation: forward

Symbol	Name	Function Class
4930593A02Rik	RIKEN cDNA 4930593A02 gene	within coordinates
Cpgi13206	CpG island 13206	1587 bp distal
Rr577270	regulatory region 577270	1875 bp distal
Rr577271	regulatory region 577271	1138 bp distal
Tssr29217	transcription start site region 29217	1969 bp downstream
Tssr29218	transcription start site region 29218	1882 bp downstream