rs30525737 SNP Detail

Summary

• ID
  rs30525737
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:150199485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGGAGTCA CTGAGTGTGA
  CTCTCAACAG TCTTCATTGT TTACTCTTGA AACCCAGGAA GATACAACAT CTGGTCAGGT
  TTAGGGACTT CCTGAAAATA TTTTTGAACT ATTTGCCTTC TCTCTTAAAA GCAGTTTCAA
  TCTCAGAGAA AGATGCCATG TGACAGGTTT ATAGCAGACG CAGCAGAATT AAACCTTGAT
  Y
  ATCCTGGCAG GACTGAAGCT CACATATCAG GCTGTGCTTG GCAGAGAAAC AGGCAGAGGT
  TGTAGTAACT GTTTCCTCCC AGCTTTGTTC TTCCTAAGAA TTGACCCAAA GCATCTCACC
  CCAGCCGTAT CATTTTATAA GTCCAGAGAT TACCTATGCA GAGGACCACT GGACATCCAT
  GTTAGGATAA TCTGGAGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47457103	NES10335951	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C			T	T	T		C
ss136082463	ENSMUSSNP2722175	ENSEMBL	ENSEMBL_Sanger	f	SNP						C
ss321021780	CHEV_3_150156812	CHEVERUD	SCREENING_POP	f	SNP							C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30525737					SNP	T	T	T	T	C	C	C	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47457103	NES10335951	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:150199485 () rs orientation: forward

Symbol	Name	Function Class
Rr587370	regulatory region 587370	within coordinates