rs30525734 SNP Detail

Summary

• ID
  rs30525734
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:150200031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCATGAAT CAACTCTTTA
  GATAATCTTT GGAAATAATG ACATTTTTCC ATCTTGTCTC TTATGTCAGC TGTCACTTAC
  TGCTCTTCAT AGGGACCAAG ATAGAAGAAA TTTTAGGAAC TGAAGAAAAA CGAACAAACA
  TCATTAGATT TTTGTAAAAC CTTGATCTAT CAGGGAACTC TTTTGTAGTG TTCATTAATT
  K
  CTTGCTCAAC TTAGATGTAT GCTTGGAGGG AGCAAACATG TCAACAGACT ACACCCCTGG
  AGGTCCCAGG GATTGGACCA CCAACCAAAG AATACACATG GAGGAACCCA TGGTGCTAGC
  TGCATATGTG GCAGAGGATG GCCGTGTTGG ACATCAGTGG GAGGAGAAGC CTGAGGGTGT
  CCAATGCCCC AATGTAGGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47457100	NES10335952	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30525734					SNP	G	G	G	G	G	G	T	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47457100	NES10335952	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:150200031 () rs orientation: forward

Symbol	Name	Function Class
Rr587370	regulatory region 587370	353 bp distal