rs30517045 SNP Detail

Summary

• ID
  rs30517045
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:103283620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAGAATA TTGTGTGATA
  TGTGAATTAT GCATTACTTT ATATGTAGAA TGTTATAAGA GACTATGGAA GTGTTTGTAA
  TTTTGTGACA GCGTCTCTCT AAGTTAGGCA GACGGGCTTA GAATTTACAC ATTTCTTGTC
  TAAGCTTTGT GAAGAGCTAA GATTACACGC ATGCACCAAC AGATATGGCT CTGCTCACTC
  R
  TAAATAGATA CAGAATTAAT TAGAAATACT AATTTATGCA AATCTAAGTC ATTTGTATAT
  GAAATATTTT TGGCTCATGG GACAAAAGGG AATTACCTAA TGCCATATTA CAGGTCATTT
  AAAACATTTT ATCAGTGAAG AAAATTTCAG TATCAAAGAT TTTTTTATAT TTACCCTAAA
  ACATTGGCTT TTATTCTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45938128	mCV23998851	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss133435082	ENSMUSSNP6482302	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss321873987	CHEV_6_103256653	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30517045					SNP	G	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:103283620 () rs orientation: forward

Symbol	Name	Function Class
Rr635872	regulatory region 635872	within coordinates
Rr635873	regulatory region 635873	222 bp proximal