rs30517019 SNP Detail

Summary

• ID
  rs30517019
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:154403254 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACACACACG CGTGCGCGCG CGCGCGCGCC TAAACATAAG
  AAAGGGAATG TAAAGGTGGT TTGACCTTAA ACTTAACAGG AGCATGTTGA TGGGAGGTAG
  M
  GCTGTCCAGC AGCTCTTACA GGGAGCTCAG AGGACAACAG CAGATAGAGC CCAGGGACAG
  AGTCAAGACA AGCAAAGAGT GAGGGGCAGA AATCCACAC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45438955	mCV24021303	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss136118023	ENSMUSSNP2387871	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30517019					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154403254 () rs orientation: forward

Symbol	Name	Function Class
Rr587889	regulatory region 587889	732 bp distal