rs30515390 SNP Detail

Summary

• ID
  rs30515390
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89256722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTATGGGAAA GGCCGGAGTC AGGGAAATGC TAAGGGTCCC AGCAAAGAGT AAGCAGAAGA
  CAAGGGGGTG GGGAGTTCAG GAGGGGACTG TGCAGGATTG AATCTCTTGA GAAAGGACTC
  TCAGCCCAAA GGAACCTAGA AGGCACAGCG AGAGCTCCCA CTGGCTTTAG GTTTTTGGAG
  GGTTTTGTTT TATCATGTTG TTAGAGGAGT GTGTTTGTGT CTGTGTGTCT GTGTGTATGT
  CTCTGTATGT GTCTCTGTGT GTGTCTCTGT ATGTGTCTCT GTGTGTGTGT GTGTGTGTGT
  R
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTCTGTGTG TGTGCGTGGT GTGTGCATGA
  CTATATGTAT GTGGTGTGTA TTTGTTTAAT TTGTTTGTTT TCAGATAGGG TCACACTTTA
  TAGTTCAAGC TGGCCTTGAA CTTGTGATCC TTCTGCCCCT GCCTTCTTTG ATGTACAGTT
  ATTAATTGCC CACCTTTCAC ACTTTTCATG GGGCAGTTGT CTGCCACTTA GAGCACTGGA
  TGGTTCTTAC ACTGAATGTA TGTACATAAG TAGAGGGATT TGTCTACCCA ATGACCCAGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45937145	mCV23955841	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs30515390					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89256722 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr634089	regulatory region 634089	712 bp proximal
Rr634090	regulatory region 634090	1776 bp proximal