rs30513053 SNP Detail

Summary

• ID
  rs30513053
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:148401326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACACTCACT GTCACCTGCT AGGTCCTGTG ACCATCTTAC
  ATCTGTCTTA CCAAGGGACT GATTCACACT GTTCCTCCTT GTGGTTTCAA TTGCACTTTC
  R
  AAGTGACTAA TGATGCTGAG TGTGTTTTCA AGTGTGGCTG GACACCTGCT GAACTTCTTT
  GGAGAAAGGT CAGTCTCGGC GCCGTATCTG TTTTTCGTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45438750	mCV24064364	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss136062992	ENSMUSSNP4500006	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30513053					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148401326 () rs orientation: forward

Symbol	Name	Function Class
Rr398123	regulatory region 398123	within coordinates
Rr587206	regulatory region 587206	within coordinates
Rr587207	regulatory region 587207	303 bp distal
Rr587208	regulatory region 587208	12 bp distal
Rr587209	regulatory region 587209	237 bp proximal
Rr587210	regulatory region 587210	876 bp proximal