rs30512645 SNP Detail

Summary

• ID
  rs30512645
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104196262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGTAGGCAGG AAGACAGACA GACAGACAAA AGAAATGAAA GAGAACAGGA AAATGGACAA
  TGAGCAGCAG TATAAGTCAT GGCGCTTTCT GTACTTTGGT CTTTCCCTGC TGCCTCTACC
  AACAGAAGCA TCAGTTGAAC TATTATTTTG AAAACCTTTT GGATCATCAG AGGAATCCGT
  TTCCTTTCGT TTTGTTTGCT CTTTTGAGAC AGAGCCTTAC AGTGCAACCC AGACTGGCCT
  GGAGCACAGT CTTCTGGCCT CAGCCATGCA TCACCATGAA CCAGCTGCTA GATTTTTTTT
  Y
  CCAGTATTAT AATTTTTTAA AGTATTGGCA TCTGTGTGAC CATCTTATTT ATATTTAAAA
  AAGAAAGTTC AGAGACAATG GTTCAGATTA TTCCAAGGGA AAAAAGAATG CCCAAATCTA
  TTCCTCATTT GGATCCTTTC TCCTACAACG ATCAGTGTGG CTGCCTGCTA CAGTCTCACT
  CCTCTCTATT TGTGCTCTTT TTACAAATAC ATTAATGATT ATACAGAAAT CCTAAAGCAG
  TCCAGTGTTT GCTTTAGGAG CTGCCTGAAC CCAGCCTTCA TGCAGCACTG GTAGCTAAAA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45438441	mCV24644902	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30512645					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104196262 () rs orientation: forward

Symbol	Name	Function Class
Rr582481	regulatory region 582481	688 bp distal
Rr582482	regulatory region 582482	126 bp proximal