rs30512199 SNP Detail

Summary

• ID
  rs30512199
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:103281638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGCT AGCTCCTTTA TTAAAGAATG
  Y
  TTTCCTATGG GTGATGACTG CAGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	KK/HlJ	LG/J	SM/J
ss45936221	mCV23998552	ABI	CRAMUS_MOUSE	f	SNP	T	T	T		C	C
ss51396013	NES13717058	PERLEGEN	MM_PANEL2	f	SNP	T			T		C	T
ss133435076	ENSMUSSNP3848425	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T			C
ss321873985	CHEV_6_103254671	CHEVERUD	SCREENING_POP	f	SNP								T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	KK/HlJ	LG/J	SM/J
rs30512199					SNP	T	T	T	T	C	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51396013	NES13717058	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:103281638 () rs orientation: forward

Symbol	Name	Function Class
Rr635872	regulatory region 635872	1861 bp proximal