CCGCT AGCTCCTTTA TTAAAGAATG Y TTTCCTATGG GTGATGACTG CAGTC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
BTBR T<+> Itpr3 |
C57BL/6J |
DBA/2J |
KK/HlJ |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss45936221 | mCV23998552 | ABI | CRAMUS_MOUSE | f | SNP | T | T | T | C | C | ||||
ss51396013 | NES13717058 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | C | T | |||||
ss133435076 | ENSMUSSNP3848425 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | C | ||||||
ss321873985 | CHEV_6_103254671 | CHEVERUD | SCREENING_POP | f | SNP | T | T | |||||||
SNP Consensus Information | ||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
BTBR T<+> Itpr3 |
C57BL/6J |
DBA/2J |
KK/HlJ |
LG/J |
SM/J |
||||
rs30512199 | SNP | T | T | T | T | C | C | T | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51396013 | NES13717058 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr6:103281638 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr635872 | regulatory region 635872 | 1861 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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