rs30511764 SNP Detail

Summary

• ID
  rs30511764
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58418958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAATGTTAC GTTATAAAAT GGAATAGAAA ACCAACAAGT
  TCATGAAAAG TAGCTGACTG GAGATTACCA AGCACTGGGG CCATGATCAG GCTTTGAAGA
  R
  GGAGAAAACC CACACTGCAG CCAGCATGAG GAGCCTTAAA GAGAGAGCAC CTCCCCTTTA
  GATCTTGGGC TTCCTCCAAA ATCCCAGGGA GATTTGCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45438429	mCV25119317	ABI	CRAMUS_MOUSE	f	SNP	A	A	G					A		G
ss46981007	NES10793028	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G		A	G	A	G		G	G	A		A
ss135206996	ENSMUSSNP5687392	ENSEMBL	ENSEMBL_Sanger	f	SNP			G							G
ss320783105	CHEV_3_58315459	CHEVERUD	SCREENING_POP	f	SNP													G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30511764					SNP	A	A	G	G	G	G	G	A	A	G	A	G	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46981007	NES10793028	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58418958 () rs orientation: forward

Symbol	Name	Function Class
Rr577240	regulatory region 577240	24 bp proximal
Rr577241	regulatory region 577241	249 bp proximal