rs30510497 SNP Detail

Summary

• ID
  rs30510497
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17629782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATACACACAA CTGCAAAATA ATTCAATTCT GTGGGGCCGT
  TGCCTTGATT AAAGACATTT ATTGTGGCCA ATCCCACGCA CTTCATAACT TTCAGATTTC
  Y
  TTTTCACTAC GATTAACACA AATACATTTA GCATTTATTT TGTGTACATA AGATATTGGG
  ATACCTTGAT ACACGCCTTA AATTACATGA CTAAGCAAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45937188	mCV23971760	ABI	CRAMUS_MOUSE	f	SNP		T					T		C
ss47814316	NES11716611	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	T	T		C	C	T	T		C	C	T	C		T
ss133019261	ENSMUSSNP2859620	ENSEMBL	ENSEMBL_Sanger	f	SNP		T							C
ss321755904	CHEV_6_17579783	CHEVERUD	SCREENING_POP	f	SNP												T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30510497					SNP	C	T	T	T	T	T	T	C	C	T	T	T	C	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47814316	NES11716611	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17629782 () rs orientation: forward

Symbol	Name	Function Class
Rr626820	regulatory region 626820	384 bp distal
Rr626821	regulatory region 626821	26 bp proximal
Rr626822	regulatory region 626822	1926 bp proximal