rs30510490 SNP Detail

Summary

• ID
  rs30510490
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:33972026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCA TGGAAGAAGT AAAACTGGCC
  Y
  CCTCTGGGTT TCCACTGGGC CCCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45436882	mCV24295680	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss134760310	ENSMUSSNP1617212	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss320700688	CHEV_3_33816799	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30510490					SNP	T	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33972026 () rs orientation: forward

Symbol	Name	Function Class
Rr575082	regulatory region 575082	1910 bp distal
Rr575083	regulatory region 575083	610 bp proximal
Rr575084	regulatory region 575084	962 bp proximal
Rr575085	regulatory region 575085	1078 bp proximal