rs30510396 SNP Detail

Summary

• ID
  rs30510396
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101055275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTACTCTA ATACATAAAT
  TAGTACCAGG AGTGGGGTGG GAAAGTATCA TTACAAATTC CTAAAATAAA TGGAGAAATA
  TCATTATAAA ATCATAAAAT CTGTGAGCAG TAGGACAGCA AGAAACAAAA GCTAAACCTA
  CTAGTTTTTA TATTAGGAAA GTGACACAAG TTATGTTCTC TGTCTGGTCT GTCACCTAAA
  Y
  TGACTAGCAA GTCAGTGATC TGAAAACTTC AAAGTAAAAA AGACAAACGT GCTGACGCTG
  AACAATACAT TCCTAGGTAG TAGCTCCAAA GCTAAATTCT ATCCAAGTGG CATGAAAAGC
  AATCCGTGAG GTGCTGAGAG ACAGCTTCAT GGCATCTACC CAATTAAAAC TGTTGCTTTC
  CTTGCAAACC TTATTGTTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45438222	mCV25367543	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss135544483	ENSMUSSNP283400	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss320851116	CHEV_3_100951882	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30510396					SNP	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101055275 () rs orientation: forward

Symbol	Name	Function Class
Rr581969	regulatory region 581969	1230 bp distal