rs30508178 SNP Detail

Summary

• ID
  rs30508178
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7731997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTTTCTCC TTTCACACAG
  CTGTAGACCT GAAGTTTCTA GAAAGTTTTC TCTTGTCCCC ATTTACAGAG GACAGAGACT
  AACCCCTCAG GTGATTCTGG TGGCTTCCTG CTTTTCCTTT ATCAGATTGC AATTCCATCT
  GAATCACCTC TGAGCTTCCA GCTACCACAG ATCTCTCACA GAAAGGGGAA GAGGGGGAGG
  R
  GTGGGTTCAC ATTGTAACTG GAGAGCCACC ATAATGCTGT ACGTGGCCAA TGCTTACTGT
  TCCAGGAGGA GGCCTACTGC ACTTGGCTCA GTCCTGTATC ATAATACCTT TAATAAAATG
  TCCTTCCCTG TTCCCGAGAG TCCTAAAATG ACATACACTG TTGAATCTTG GTTTGACTTG
  GGTTGAAGCC CGTAAATGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45936089	mCV24779815	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss132954093	ENSMUSSNP2471346	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30508178					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7731997 () rs orientation: forward

Symbol	Name	Function Class
Rr626314	regulatory region 626314	175 bp proximal
Rr626315	regulatory region 626315	980 bp proximal
Rr626316	regulatory region 626316	1240 bp proximal