rs30507311 SNP Detail

Summary

• ID
  rs30507311
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:141748463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTAA AAGTTCAAGA AAGTTATTTT
  R
  GGAATAAATT GTATGATGGA ATGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	WSB/EiJ
ss45436684	mCV25104410	ABI	CRAMUS_MOUSE	f	SNP		A	A				A		G
ss61089236	NES16604387	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	WSB/EiJ
rs30507311					SNP	A	A	A	A	A	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61089236	NES16604387	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141748463 () rs orientation: forward

Symbol	Name	Function Class
Bmpr1b	bone morphogenetic protein receptor, type 1B	Intron
D3Mit160	DNA segment, Chr 3, Massachusetts Institute of Technology 160	1088 bp distal
D3Mit160.2	DNA segment, Chr 3, Massachusetts Institute of Technology 160.2	956 bp distal
Rr586379	regulatory region 586379	866 bp proximal