rs30503812 SNP Detail

Summary

• ID
  rs30503812
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54555451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCCAAAGT TTTCTAAGGA
  ACTCATAAGA TAATCTCTGA ATCTAGAGAT GTTAGTCACG GGGCCTAAAG GAATACACCT
  CCACTGAACC AACAAGAAAA AACAGCAGTA GCAGAAAATA GGCTGCAGAA ATCTGCACCA
  GGCTTCCCAG ATTTTTAAAA CAAGGATTCC TGAGTGATAT GTGAAAATGG TTTGCTAATT
  Y
  TTAAAAACTA CGTGCTTAGC ATGTTAAGTC TCTCAGCATC TGATATAAGT GAATTTTTCT
  TTAGGGCAGC AAGACTTGGT TTGGGTTTAG CTGTAGTGCA GGGGGTAAAA TTCAGGACCC
  TGCCCTTGCA CATGCAGGCA AGGACTGTAC CACTGAGCTG CACCTCAGGG CTCACAACCT
  TTCATTTAAC AACAATTGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46954994	NES10814711	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30503812					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46954994	NES10814711	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54555451 () rs orientation: forward

Symbol	Name	Function Class
Rr576822	regulatory region 576822	131 bp distal