rs30503810 SNP Detail

Summary

• ID
  rs30503810
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54555309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCCCCACC CCCAATAATG
  AATGTTTATC CCAGCTCTTT TCCTTGCCAG AATGTTTTGC AGCCAAGCAC TAAATCAGAA
  GCCAGTAGAT TTCCCTGGAG GTATGACCAC ATCGAATACT CAGCAAGGCT TGAATTCATT
  TTGTTCCAAA GTTTTCTAAG GAACTCATAA GATAATCTCT GAATCTAGAG ATGTTAGTCA
  Y
  GGGGCCTAAA GGAATACACC TCCACTGAAC CAACAAGAAA AAACAGCAGT AGCAGAAAAT
  AGGCTGCAGA AATCTGCACC AGGCTTCCCA GATTTTTAAA ACAAGGATTC CTGAGTGATA
  TGTGAAAATG GTTTGCTAAT TTTTAAAAAC TACGTGCTTA GCATGTTAAG TCTCTCAGCA
  TCTGATATAA GTGAATTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss46954992	NES10814709	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	T	C	C	C	T		C	T	T	C
ss320772292	CHEV_3_54451810	CHEVERUD	SCREENING_POP	f	SNP										T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs30503810					SNP	C	C	T	C	T	C	C	C	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46954992	NES10814709	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54555309 () rs orientation: forward

Symbol	Name	Function Class
Rr576822	regulatory region 576822	within coordinates