rs30503003 SNP Detail

Summary

• ID
  rs30503003
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:60492090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAAT GTTATAGATT TAATGTATTC
  R
  TAATAATTTT AAGAGATACA AATAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss45436527	mCV23103740	ABI	CRAMUS_MOUSE	f	SNP	A	G			G	G
ss46984403	NES10792640	PERLEGEN	MM_PANEL2	f	SNP		G	G	A		G		G		A
ss135219734	ENSMUSSNP3150111	ENSEMBL	ENSEMBL_Sanger	f	SNP		G				G
ss320786702	CHEV_3_60388591	CHEVERUD	SCREENING_POP	f	SNP							A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs30503003					SNP	A	G	G	A	G	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46984403	NES10792640	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60492090 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mbnl1	muscleblind like splicing regulator 1			Intron
				Noncoding-Transcript-Variant
Rr577433	regulatory region 577433			1692 bp distal
Rr577434	regulatory region 577434			1548 bp proximal