rs30501700 SNP Detail

Summary

• ID
  rs30501700
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17901099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAAAACTA GGCATTTTAA GGTGAATGGA TAAAAGATGA
  TGATATTCTT TTAAACTATA AAACCCTGAT AGTTTTGAAC TGTGATAAGA CATGGTCTTT
  S
  TTCTCTAAAC AAGCTCTGCT TTTAGGCAAA AAGCAGAGTT CAGGCAGTCT CTTCCTGTTT
  TCACTGACTA TCGCACATCT TCAGCTCAAA ATAACCCTC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45436513	mCV22664175	ABI	CRAMUS_MOUSE	f	SNP	G	C	G
ss134654082	ENSMUSSNP2694697	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30501700					SNP	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17901099 () rs orientation: forward

Symbol	Name	Function Class
Gm42187	predicted gene, 42187	within coordinates
Gm65968	predicted gene, 65968	within coordinates
Rr573861	regulatory region 573861	561 bp proximal
Rr573862	regulatory region 573862	1438 bp proximal