rs30499285 SNP Detail

Summary

• ID
  rs30499285
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:29867974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTGTTTCTC GTCAGTCCTC TTTCTTGCCT AGTTGGTAGG
  CTGTGATGGG AAGGGAGGCG AATGCCAATG GAAACATGCC TCCAGTGGTT CACAATGAAC
  W
  CTGGCTAGGA TTCTAACAGT AGGAGCTGAG CAGGGTGGGA CAGGGGCAGA GAGGAGCAAG
  GAATAACTTT GAATAAGTTT GTTTCCTTCT CTCATCCTC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45435008	mCV24264020	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30499285					SNP	T	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:29867974 () rs orientation: forward

Symbol	Name	Function Class
Gm33206	predicted gene, 33206	within coordinates
Gm65557	predicted gene, 65557	243 bp downstream
Rr574687	regulatory region 574687	1180 bp distal
Rr574688	regulatory region 574688	631 bp distal
Rr574689	regulatory region 574689	723 bp distal