rs30497696 SNP Detail

Summary

• ID
  rs30497696
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54479211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGTTTTAT GTCACCTCCT TTGACTGCTG CTTTATCTTA
  TTTCTGTTGG TTCCCAAGTA ATGGCATCAC TCACTTTTAG GGTGCCATAT CTTTTTTTTT
  Y
  CTCCACTTTA GTCTCCACAA AGTGCCTCCC AACCTGACAC AACTCCTACG TTCTCTCACA
  TGGGAGAGTA AGATGAAAGT CAACAAGGAG TCTTGTTTGA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	MOLF/EiJ	WSB/EiJ
ss46954406	NES10819531	PERLEGEN	MM_PANEL2	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	MOLF/EiJ	WSB/EiJ
rs30497696					SNP	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46954406	NES10819531	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54479211 () rs orientation: forward

Symbol	Name	Function Class
Gm65161	predicted gene, 65161	within coordinates
Rr576809	regulatory region 576809	1088 bp distal
Tssr29130	transcription start site region 29130	1873 bp downstream