rs30478868 SNP Detail

Summary

• ID
  rs30478868
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:120019570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGCTCAGTG GCCGAACGCA TGCTGCCGTG CGTATGGCCT
  TCTTGTGTCA GATCCCTAGT ACGGCAAACA CACACACATG CAGATTAAAT AAACAAATTA
  M
  ATAACTCTTT GATTGACCTC TGGTGTTCTG TGTGTTCAGA AAGAGAAAAA AAAAAGCAGG
  TGTAATATAC CTTTGGTTAT TGTGAAATTT AAGAAGCTA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45934062	mCV24680868	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
ss133594597	ENSMUSSNP2361161	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss321929678	CHEV_6_119992627	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30478868					SNP	C	C	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:120019570 () rs orientation: forward

Symbol	Name	Function Class
Gm66353	predicted gene, 66353	1279 bp downstream
Rr637763	regulatory region 637763	122 bp proximal