rs30474183 SNP Detail

Summary

• ID
  rs30474183
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:126069605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCAAGCTG TTCCATGCAA
  TATGATAAAG TCAATGCCAC AGCTATCTTA TTTTTAAGGA CCAATTGGTT ATTACTGTTA
  AGGCCATGTC TATCTATTTT AACATTAATA CATGGCTATT AAATTAACAA AGCATTAAGT
  CATCATCACA AAGTCTTATT TGTTTAGCCA GTCAACATGT TTATATTAAT ATGAGATGAT
  K
  GCTACATTGA CACAGTGCTT AACATGCATA GTTTTGAATA CTATAACGGT GATTTATTTC
  ACTTTGTTTT ATTTTCCACA TAAGATTCTA ACCATGCAGT TTAATCGTAT GCAGTGGTAA
  CACACTTGAC CATATACCAA CCTGCAGACA GTGATGCTGT AGCAGGATAG TTTCCCTGCA
  GCCTGGTGAA AGAAGGCCAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45516918	mCV23909551	ABI	CRAMUS_MOUSE	f	SNP		G					G		T
ss46951994	NES10690870	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	T	G		G	T	G	G	T	G	G	G
ss135827548	ENSMUSSNP6604562	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30474183					SNP	G	G	G	G	T	G	G	G	T	G	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46951994	NES10690870	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:126069605 () rs orientation: forward

Symbol	Name	Function Class
Rr584628	regulatory region 584628	169 bp proximal