rs30472309 SNP Detail

Summary

• ID
  rs30472309
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:61008687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTTTGGGGTG AGCTGGCTTC TGTGATTTGT ACATAGAGAG GCATCTGGAT TGCAGAGATG
  GCATGAAATA GGGGCTGAGA GAGAAGCAGG AGGGAGGACG ATGGAGAGAG TGAATCCTGA
  GGGCTGTGGA CCACCACAAC CCAGCTTCTC TGAAGCAGCG GCAGCTTGTG GGTTCCGAGA
  GGTGTCCAGT AGAGTTTTCA ATAACAAAGA GGAAATAACT CACATTATGT GTGCGTACAT
  GTGGATGCTT GCATGCTCTT GCGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGC
  R
  CGCACATGAA TGTAATGGTG CATGTGTATG TGAGTAGAGA GTCCAGAGGA CAACTTCTGG
  TATCATTCCT CAAGAGCCAT CCACCTTTAG TTTAGACATA GGTTCTCTCC TTGCTATGTA
  TTGTTAATAA GGCTACCCTG GCTGGTAGTG AGCCCCAGGG AAATACCAGT TTCTGACTCC
  CCAGTATGGG GTTACAAACA TGTTCCGGGG GTCTTGTTGT TGGTTATTGT TGGTGTTTTT
  GACTGAGTGT CACTATGTAG CCCTGGCTGG CCTAGAACTC ATTATGCAGC CAAGGCTGAC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46411190	mCV24173943	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30472309					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:61008687 () rs orientation: forward

Symbol	Name	Function Class
4933433G08Rik	RIKEN cDNA 4933433G08 gene	1607 bp downstream
Gm34004	predicted gene, 34004	within coordinates
Rr680448	regulatory region 680448	206 bp proximal