rs30471441 SNP Detail

Summary

• ID
  rs30471441
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:135391191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATATGTC CCAGTACAGA
  GGAACGCCAG GGCCAAGAAG TGGGGTTTGG TGGGGAAGGG AGCAGGGTGG GGCGAGGGCA
  TAGGGATAGC ATTTGAAATG TAAATGAAGA AAATACCTAA TAAAAAATGG AAATGAAAAA
  AAACCCACGA GGTAGAAATT TGTATTAACA TATCTGGAAG AGTCACTATC TCAGTCCTAA
  R
  TTTCCTGTCT TTGAGGACAT ATTTTCTAAA ACAATTCAGC CATTTATTTT TCTATTAGAA
  TGAGCTGTGG GCTTGACAGA GAGAGCCAGT TGCTCCGTAG AGACCGTTAC TATTCTTCTC
  CGCACACGGA GAGACTTGAG AACTACAGGG GATATGGTAG GTAGCCGGTG GGTGTGCTCT
  CACATGGATC TACGGCATAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45433677	mCV25339475	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss135928491	ENSMUSSNP7137092	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30471441					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135391191 () rs orientation: forward

Symbol	Name	Function Class
Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105	Intron
Rr585765	regulatory region 585765	1044 bp proximal