rs30470726 SNP Detail

Summary

• ID
  rs30470726
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148601493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTCACAA GCAAATGCAC
  ACCATTGGCC GCATGGCTTT AGTTCCTTTC CACAGCCCCA TATGGTCACT GCAGACAATT
  TTACCTCACC ATTATAGGTC AGAAACCCCT AAGAAGATGT TTCAAATGTT TAATGGCTAA
  CAATCCTTCA AAACCCCTTA TTGATGGGAA CTATTAAGGT CACTGGTTTA CGGAGGAAGA
  S
  AGCGAGGCTA AGTAAGATTT CAGTTCCTCA TGCTTTCACA TGCTGTAAGG ATGCTCTGAC
  AGGTCGCTTT CATGACTCTC CACATCATGA CAGCCATCGG CCGTAAGTTG CCATGGAGGG
  CGGGCTTCTG CTGTGCTGTG TGCTGTCAGT CTTGGGCGAG AAAAGGGATA GAAAGGAAAA
  CTGTGTGTGA TGGTCAAATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47450796	NES10331221	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30470726					SNP	C	C	C	C	C	C	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47450796	NES10331221	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148601493 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587222	regulatory region 587222	within coordinates
Rr587223	regulatory region 587223	466 bp proximal