rs30470659 SNP Detail

Summary

• ID
  rs30470659
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:54267900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTGTTTCT TAATATGCAT TTAATTGCCA CATTATTTCT
  GGATTAGTAA TACTTGTTTC CAGGGCTTAT CAGAGTATGC AGTGTGTGTG TAATGGAAAA
  M
  AAAAAAAAGT AAAATTGTGA GAAAGATAGA TAGATAGATA GATAGATAGA TAGATAGATA
  GATAGATATA TTTCAAAAGT TAGAGAAATT CTCCCAAAGT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	NZW/LacJ
ss46952249	NES10831864	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	NZW/LacJ
rs30470659					SNP	C	C	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46952249	NES10831864	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54267900 () rs orientation: forward

Symbol	Name	Function Class
Gm31095	predicted gene, 31095	within coordinates
Postn	periostin, osteoblast specific factor	Intron
Rr576781	regulatory region 576781	1303 bp distal
Rr576782	regulatory region 576782	421 bp proximal
Tssr29127	transcription start site region 29127	624 bp upstream