rs30470458 SNP Detail

Summary

• ID
  rs30470458
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101198704 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCCACTCG GTGGGTGGGG
  TAGACCTTGG CTTCATCTGC CTTAGTGTCA GCAAAGGGGA GGGAGGTTAA AGCTCTCAGA
  TGCGGACAGC TGGTCCCAAG GTGACCAAGG CAGGTACTGT CCTTGAGTGG CGGAGCGGGA
  GCAGAGTTTG CACACTAAGG TCGGTCTGCA GGAGTTCAGC GCTCTGGGAC CTCCTCTTCC
  R
  GCCTTCCTCC TAGAGGAAAA GGAAACACCT TTTACAAATA GATACTTCCT CTATACATGC
  TAATATCCCT TTCAAAGGAA ACCTTGCATC CTATTTGTGG TTCTTTCTTT GTCTCTGAGA
  GTTCTCAACA GCATTTGGCA TAAAATAATC TGCGTTCCAA AGAGGCACAA TTTGGGATGC
  ATATTTTGAT ACCCTTTATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss45433664	mCV22287085	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs30470458					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101198704 () rs orientation: forward

Symbol	Name	Function Class
Gm32803	predicted gene, 32803	within coordinates
Rr581993	regulatory region 581993	1591 bp distal
Rr581994	regulatory region 581994	1062 bp distal
Rr581995	regulatory region 581995	452 bp distal
Rr581996	regulatory region 581996	within coordinates
Rr581997	regulatory region 581997	1157 bp proximal
Tssr34785	transcription start site region 34785	634 bp upstream