rs30469230 SNP Detail

Summary

• ID
  rs30469230
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57521648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCACTGA ACAGGAGACT
  CACCATTGAG TCCACAACTG GCTGGACTCA AAGCATTTGT CCTTTTTATA AACATATCTA
  GTTGCCCAGA TGAATCTTAT CTTTGCTCCA TGCATTGGAA ACAAGACTTT ACAAGCTTGC
  CTTTAGACTC TAAACTGTAT AAATTCATGA GTGAGTGGCA GTGAGCACTC ATGATCAAGC
  R
  GGATCACAGT ATCTGTTACC AAGTGATATA TGCCAAAGCA GTGCTCTTAA GATATAACTA
  AAACAGAGCC AAGTTCCCTC CTGTGTAATC TTCATAAACA GTATTCAAAA AATGCTTTTT
  TGTCAGGGCA ATGAAGTGAA GGAACGAATA ATTATTTCTA TGTAAACACA TAACAATAGA
  AAAGTACAAA TAATATTAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ
ss45932957	mCV25134791	ABI	CRAMUS_MOUSE	f	SNP	G	A			A		A
ss51315055	NES13763332	PERLEGEN	MM_PANEL2	f	SNP		A	A	A		G		G	G
ss133241521	ENSMUSSNP3865788	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A					A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ
rs30469230					SNP	G	A	A	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51315055	NES13763332	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57521648 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr631144	regulatory region 631144	775 bp distal
Rr631145	regulatory region 631145	within coordinates